Transcriptome analysis (Kallisto/Salmon or prokaryote)

• Adapter trimming and reads quality control in order to generate HQ reads
• Transcript quantitation and abundance estimation using pseudo alignment approach.
• Differential expression analysis based on experimental design
• Identification of Up and Down regulated transcripts
• Graphical representation of differentially expressed transcripts
Transcriptome analysis utilizes tools like Kallisto and Salmon for rapid and accurate gene expression profiling from RNA-Seq data. It facilitates the quantification of transcripts for molecular transcriptomic research in both prokaryotic and eukaryotic systems.